Entry data

Protein name : prot72901

Protein sequence : MDQASSSKRKRGGRPKSKYWNEAEQLGKDTWKCNHCKEKFGGGATRIEEHITGKGNNIRKCPKYRGNLGGHIILASGSSTSPQEALNILNQLQEDENNLGDQILEHDPAAFESNDIEKAFFYPKGDPDAVCIRKSDIELLQPQKCLNDNIIDFYIKYLINKLPTDKQDRFHFFNCFFFPKLVDLSTDNPSIASDGKAAFQRVSKLTRKVNLFEKNYIFIPINYSLHWSLIVICHPAEVMTCYRDEETKGSPKEACILHMDSRKGIHQDLHNVFQSYLCEEWKERHNNVRDDVSSIFLDLPFVPLELPQQQNAYDCGIFLLHYVERFLEQAPINFNRSLISKFSYWFPPPDASLKRSHIHKLLIAAEGDNKMIVGGSVNPQNNTQLSALLGGDVEDHAVNGGSNGDDALTINRLLSDLAWEEDYFDKRLQWREFQGNKRERQHDDWLDELKDLKKRAIDVKNSLHQSGSTNEFPKPSELDDEYDDLLEENPWVSRDENVKEMWDLLEDEEVFIIGIDGMGGVGKTFMATHIKNEIKRKGTFKDVFWVTVSDDFTTFKLQHDIAETIQVKLYGDEMTRATILTSELEKREKTLLILDDVWDYIDLQKVGIPLNGIKLIITTRLKHVCLQMDCLPNNIITIFPFEEEEAWELFLLKLGHRGTPARLPPHVLEIARSVVMKCYGLPLGISVMARTMKGKDEIHWWRHALNKLDRLEMGEEVLSVLKRSYDNLIEKDIQKCFLQSALFPNDISQEQWVMMVFESGLLNGKGSLEEIFDEARVIVDKLINHSLLLGGWRLRMNGLVRKMACNILNENHTYMIKCHENLTKIPQMREWTADLEAVSLAGNEIEEIAEGTSPNCPRLSTFILSRNSISHIPKCFFRHMNALTLLDLSYNYELTSLPKSLSKLRSLTSLVLRECRQLEYIPPLGDLHALSRLDISGCDSLLRVPEGLQNLKKLQCLNLSRDLYLSLLLGCALPGLSNMQYLDLRGWSGIIVEDVKGMTKLECFAGSFLDQDNYNRYVQEIQDTGYGPQTYFIYFGKFDDFPLGFRTLVMDLKRPRVYFGDCDELPYLLPRDLAELLVIGNDQWECLCAALSSNGSLSLKDINIRDCTKLKSLFCVSCPLCTNIQNLKSLKLDNLDSLSVICKEDVAGLTQSLSRSEVFSHLKELSIIRCDQIEKLLTAGLVAQLQNLESISVSYCKSIKEIFAGDSSDNIALPNLTKLQLYRLPELKTVCKGILLCNSLDILGIDDCPNHEKPRIGRV

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Results

Bellow are shown (if any !) the potential LRR motifs identified by LRRpredictor.

Probabilities (maximum value 1.0) are shown for each classifier (clf 1-8).

#Protein

pos

clf1

clf2

clf3

clf4

clf5

clf6

clf7

clf8

LRRpred

-5

-4

-3

-2

-1

L

x

x

L

x

L

+6

+7

+8

+9

+10

prot72901

834

0.854

0.965

1.000

0.805

0.879

0.904

1.000

0.805

0.901

E

W

T

A

D

L

E

A

V

S

L

A

G

N

E

I

prot72901

858

0.798

0.963

1.000

0.765

0.778

0.903

1.000

0.792

0.875

P

N

C

P

R

L

S

T

F

I

L

S

R

N

S

I

prot72901

882

0.931

0.982

1.000

0.764

0.947

0.912

1.000

0.833

0.921

R

H

M

N

A

L

T

L

L

D

L

S

Y

N

Y

E

prot72901

906

0.954

0.976

1.000

0.806

0.918

0.902

1.000

0.843

0.925

S

K

L

R

S

L

T

S

L

V

L

R

E

C

R

Q

prot72901

929

0.914

0.976

1.000

0.820

0.901

0.907

1.000

0.745

0.908

G

D

L

H

A

L

S

R

L

D

I

S

G

C

D

S

prot72901

953

0.947

0.972

1.000

0.787

0.948

0.908

1.000

0.833

0.924

Q

N

L

K

K

L

Q

C

L

N

L

S

R

D

L

Y

prot72901

978

0.945

0.976

1.000

0.814

0.955

0.913

1.000

0.834

0.930

P

G

L

S

N

M

Q

Y

L

D

L

R

G

W

S

G

prot72901

1000

0.951

0.953

1.000

0.845

0.937

0.890

1.000

0.723

0.912

K

G

M

T

K

L

E

C

F

A

G

S

F

L

D

Q

prot72901

1029

0.745

0.337

0.794

0.611

0.856

0.377

1.000

0.435

0.644

G

Y

G

P

Q

T

Y

F

I

Y

F

G

K

F

D

D

prot72901

1053

0.749

0.558

0.996

0.016

0.829

0.785

1.000

0.098

0.629

V

M

D

L

K

R

P

R

V

Y

F

G

D

C

D

E

prot72901

1098

0.803

0.725

1.000

0.718

0.864

0.867

0.997

0.686

0.832

N

G

S

L

S

L

K

D

I

N

I

R

D

C

T

K

prot72901

1109

0.862

0.842

1.000

0.824

0.813

0.895

1.000

0.508

0.843

R

D

C

T

K

L

K

S

L

F

C

V

S

C

P

L

prot72901

1126

0.950

0.936

1.000

0.875

0.944

0.899

1.000

0.863

0.933

T

N

I

Q

N

L

K

S

L

K

L

D

N

L

D

S

prot72901

1161

0.955

0.940

1.000

0.807

0.951

0.894

1.000

0.728

0.909

E

V

F

S

H

L

K

E

L

S

I

I

R

C

D

Q

prot72901

1187

0.956

0.953

1.000

0.760

0.958

0.893

1.000

0.711

0.904

A

Q

L

Q

N

L

E

S

I

S

V

S

Y

C

K

S

prot72901

1215

0.968

0.951

1.000

0.881

0.968

0.904

1.000

0.569

0.905

I

A

L

P

N

L

T

K

L

Q

L

Y

R

L

P

E

prot72901

1239

0.876

0.944

1.000

0.811

0.875

0.900

0.999

0.566

0.871

L

L

C

N

S

L

D

I

L

G

I

D

D

C

P

N

Download

Short version - contains only identified potential LRR motifs (if any) :
prot72901.predshort.txt

Long version - contains LRRpredictor probabilities for each amino acid :
prot72901.pred.txt

Data used as input for LRRpredictor - RaptorX-property SS, RSA, disorder predictions and variability profile.
prot72901.input

For details regarding each output file please see About